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New Study Suggests Many Unknown Microbes in Soil

Date:
November 12, 2007
Source:
American Society for Microbiology
Summary:
Metagenomic analysis of microbial biodiversity in soil samples suggest that non-bacterial species greatly outnumber bacterial species. This means the majority of microorganisms on the Earth remain undiscovered, according to new research.

Metagenomic analysis of microbial biodiversity in soil samples suggest that non-bacterial species greatly outnumber bacterial species. This means the majority of microorganisms on the Earth remain undiscovered, according to researchers from the University of Colorado, University of South Florida, San Diego State University and Duke University.

Soil microorganisms represent a significant portion of living matter on Earth and play a key role in ecosystem functions. Bacteria, fungi, archaea and viruses are the four microbial groups currently known to man. Bacterial presence in soil has been the most extensively studied, however with the environment at the forefront of worldwide focus, expanded research on fungal, archaeal, and viral communities is much needed.

In the study researchers used an RNA-based analysis technique to examine the richness of bacteria, fungi, archaea, and viruses in samples collected from prairie, desert, and rainforest soils. These sites were specifically targeted because they represent globally dominated ecosystem types and are broad in aridity and productivity. Results showed that unique archaeal or fungal units appeared to rival or exceed unique bacterial units in each of the soil samples.

"In this first study, to comprehensively survey rival communities using a metagenomic approach, we found that soil viruses are taxonomically diverse and distinct from the communities of viruses found in other environments that have been surveyed using a similar approach," say the researchers. "Within each of the four microbial groups, we observed minimal taxonomic overlap between sites, suggesting that soil archaea, bacteria, fungi, and viruses are globally as well as locally diverse."

Journal reference: N. Fierer, M. Breitbart, J. Nulton, P. Salamon, C. Lozupone, R. Jones, M. Robeson, R.A. Edwards, B. Felts, S. Rayhawk, R. Knight, F. Rohwer, R.B. Jackson. 2007. Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil. Applied and Environmental Microbiology, 73. 21: 7059-7066.


Story Source:

The above story is based on materials provided by American Society for Microbiology. Note: Materials may be edited for content and length.


Cite This Page:

American Society for Microbiology. "New Study Suggests Many Unknown Microbes in Soil." ScienceDaily. ScienceDaily, 12 November 2007. <www.sciencedaily.com/releases/2007/11/071108175543.htm>.
American Society for Microbiology. (2007, November 12). New Study Suggests Many Unknown Microbes in Soil. ScienceDaily. Retrieved April 17, 2014 from www.sciencedaily.com/releases/2007/11/071108175543.htm
American Society for Microbiology. "New Study Suggests Many Unknown Microbes in Soil." ScienceDaily. www.sciencedaily.com/releases/2007/11/071108175543.htm (accessed April 17, 2014).

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