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Coding For Arthropods: What's So Special About Insects And Spiders?

Date:
April 30, 2006
Source:
Public Library of Science
Summary:
Scientists have found evidence for parallel evolution of an alternate genetic code in arthropod mitochondria (AGG is translated into lysine rather than serine), and correlated co-evolution of the tRNA-Lys/Ser anticodons, according to a study published in PLoS Biology.

The horseshoe crab uses the newly discovered genetic code (AGG translates into lysine rather than serine). Parallel evolution of this and the typical code of invertebrate mitochondrial genomes (which is correlated with tRNA mutations) occurred repeatedly along the evolutionary history of arthropods. (Figure: horseshoe crab lithograph by George Endicott)

The central dogma of molecular biology is that DNA makes RNA makes protein. This relies on a specific underlying code which relates given triplets of RNA nucleotides into specific amino acids. Each of the 20 amino acids is represented by one or more RNA triplets, or codons: UAC is decoded as tyrosine, for example, and UGC as cysteine. (U is the RNA nucleotide containing uracil, A is adenine, C is cytosine, and G is guanine.) For some time the code had been thought to be the same in all organisms. But exceptions have been seen before, particularly in mitochondria.

In a new study published online this week in the open-access journal PLoS Biology, Federico Abascal, Rafael Zardoya, and colleagues show that in the mitochondria of arthropod there are two nonstandard codes, and suggest that genetic code changes within a lineage may be more frequent than was earlier believed.

The authors aligned the mitochondrial coding sequence from >600 animal species looking for conserved codons and identifying which amino acid (AA) it specified in the corresponding protein. The most frequent AA was taken to be the canonical translation of that codon. What they found was that although most codons adhered to the common genetic code in all species, there was nonetheless a surprising trend in the arthropods, the largest of all animal phyla. Typically, AGG translates as the amino acid serine. However, among the arthropod mitochondrial genomes, AGG coded for serine in some species and lysine in others. The authors' analysis of the patterns of change also suggests that the original arthropod mitochondrion used AGG for lysine, not serine.

The observed variety suggests the code has changed multiple times between the two genetic codes. It might be that pairing of AGG and lysine is disadvantageous for the organism employing it, so that loss or reversion over time would be favored. This might also suggest the existence of multiple other nonstandard codes within other lineages. Who knows what other alternatives might be decoded with this method in the future.

Citation: Abascal F, Posada D, Knight RD, Zardoya R (2006) Parallel evolution of the genetic code in arthropod mitochondrial genomes. PLoS Biol 4(5): e127.



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Public Library of Science. "Coding For Arthropods: What's So Special About Insects And Spiders?." ScienceDaily. ScienceDaily, 30 April 2006. <www.sciencedaily.com/releases/2006/04/060430002720.htm>.
Public Library of Science. (2006, April 30). Coding For Arthropods: What's So Special About Insects And Spiders?. ScienceDaily. Retrieved October 23, 2014 from www.sciencedaily.com/releases/2006/04/060430002720.htm
Public Library of Science. "Coding For Arthropods: What's So Special About Insects And Spiders?." ScienceDaily. www.sciencedaily.com/releases/2006/04/060430002720.htm (accessed October 23, 2014).

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