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Scientists create new map of brain region linked to Alzheimer's disease

Detailing the mouse hippocampus reveals structures and functions others can follow to treat human illnesses

October 8, 2018
University of Southern California
Scientists have now completed an exceptionally detailed map of the brain's memory bank, the hippocampus. Intricate insight into hippocampus' structure and function opens new opportunities to treat diseases such as Alzheimer's.

Curing some of the most vexing diseases first requires navigating the world's most complex structure -- the human brain. So, USC scientists have created the most detailed atlas yet of the brain's memory bank.

Cartographers of the cranium, a USC research team has illustrated the internal circuitry of the hippocampus in detail that would make the great ancient mapmaker, Ptolemy, proud. Using fluorescent tracers and 3-D animation, the scientists show structures, nerve connections and functions in vivid detail. The study appears today in the journal Nature Neuroscience.

"Like a new atlas, we've constructed the most detailed diagram of the hippocampus to date," said Michael S. Bienkowski, lead author of the study and a researcher at the USC Institute for Neuroimaging and Informatics in the Keck School of Medicine of USC. "With a better map, we can see each region and how it functions. A better map is a resource scientists can use to better understand the hippocampus and how its degeneration leads to diseases."

The human hippocampus sits at the base of the brain and it's shaped like a seahorse. It stores memories, helps regulate emotions and guides navigation by spatial processing. It's the first part of the brain impaired by Alzheimer's and hippocampus degeneration can cause epilepsy and other diseases.

In this case, scientists worked on a mouse brain because it's organized similar to a human brain. Scientists can use the new map of the hippocampus to deliver genetically-targeted drugs to specific neurons with fewer side effects, said senior author, Hong-Wei Dong, USC professor of neurology and director of the USC Center for Integrated Connectomics (CIC).

The work is part of the Mouse Connectome Project, a USC-led effort that collects lots of data about neural connections in the brain and shares it publicly with researchers in more than 100 countries. Disconnections in the brain underlie Huntington's disease, Parkinson's disease, Alzheimer's disease, autism spectrum disorders and many other illnesses.

Scientists have known the basic four-part architecture of the hippocampus for a long time. What's different now is the USC scientists can show its sub-regions and how nerve cells interact across the structure. It's a night-and-day difference, akin to seeing transmission lines and power poles slung across a city by day compared to fully illuminated at night. This new visualization traces neural pathways and connections in remarkable detail using fluorescent dyes as tracers that reveal cells, neuron junctions and connections to the rest of the brain.

"It totally changes our understanding by combining a wiring diagram with gene expression of the mouse hippocampus. We see it doing different things, and this gives us a new way to understand how the whole thing works together. This should have a very profound and broad impact," Bienkowski said.

Alzheimer's disease is the sixth leading cause of death for older people and the leading cause of dementia in the United States, according to the National Institute on Aging. It accounts for 93,500 deaths nationwide annually, and the prevalence and rate of death is increasing as the population ages, according to the U.S. Centers for Disease Control and Prevention.

The work was supported by the National Institutes of Health/National Institute of Mental Health (R01 MH094360-01A1), NIH/NCI (U01 CA198932-01), NIH/NIMH (RF1 MH114112-01), NIH/NIMH (U01 MH114829-0), NIH/NIMH (F32 MH107071-01-A1), and a pilot fund of the Alzheimer's Disease Research Centers (P50-AG05142).

Story Source:

Materials provided by University of Southern California. Original written by Gary Polakovic. Note: Content may be edited for style and length.

Journal Reference:

  1. Michael S. Bienkowski, Ian Bowman, Monica Y. Song, Lin Gou, Tyler Ard, Kaelan Cotter, Muye Zhu, Nora L. Benavidez, Seita Yamashita, Jaspar Abu-Jaber, Sana Azam, Darrick Lo, Nicholas N. Foster, Houri Hintiryan, Hong-Wei Dong. Integration of gene expression and brain-wide connectivity reveals the multiscale organization of mouse hippocampal networks. Nature Neuroscience, 2018; DOI: 10.1038/s41593-018-0241-y

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University of Southern California. "Scientists create new map of brain region linked to Alzheimer's disease." ScienceDaily. ScienceDaily, 8 October 2018. <>.
University of Southern California. (2018, October 8). Scientists create new map of brain region linked to Alzheimer's disease. ScienceDaily. Retrieved April 12, 2024 from
University of Southern California. "Scientists create new map of brain region linked to Alzheimer's disease." ScienceDaily. (accessed April 12, 2024).

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