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Another step closer to fully sequencing the salmon genome

Date:
June 15, 2010
Source:
Genome BC
Summary:
The economically important, environmentally sensitive Atlantic salmon species is one step closer to having its genome fully sequenced, thanks to an international collaboration involving researchers, funding agencies and industry from Canada, Chile and Norway.

The economically important, environmentally sensitive Atlantic salmon species is one step closer to having its genome fully sequenced, thanks to an international collaboration involving researchers, funding agencies and industry from Canada, Chile and Norway.

Genome BC partnered with the Chilean Economic Development Agency, InnovaChile, Norwegian Research Council, Norwegian Fishery and Aquaculture Industry Research Fund to form the International Cooperation to Sequence the Atlantic Salmon Genome (the Cooperation).

Together they are well underway on a multi-million dollar, multi-phased project that will produce a genome sequence that identifies and maps all of the genes in the Atlantic salmon genome and can act as a reference/guide sequence for the genomes of other salmonids (e.g. Pacific salmon, rainbow trout and more distantly related fish such as smelt and pike.)

Phase one of the project was awarded to Beckman Coulter Genomics to produce a 4X coverage genome using paired-end, plasmid, fosmid and BAC Sanger sequences. It is expected that this phase will be complete in January, 2011.

The Cooperation is gearing up for phase two which will result in a high definition and well-annotated genome using primarily next generation sequencing technologies. The Cooperation is seeking interested parties (publically or privately funded genome sequencing centres, or public/private partnerships) to undertake phase two.


Story Source:

The above story is based on materials provided by Genome BC. Note: Materials may be edited for content and length.


Cite This Page:

Genome BC. "Another step closer to fully sequencing the salmon genome." ScienceDaily. ScienceDaily, 15 June 2010. <www.sciencedaily.com/releases/2010/06/100614171905.htm>.
Genome BC. (2010, June 15). Another step closer to fully sequencing the salmon genome. ScienceDaily. Retrieved September 30, 2014 from www.sciencedaily.com/releases/2010/06/100614171905.htm
Genome BC. "Another step closer to fully sequencing the salmon genome." ScienceDaily. www.sciencedaily.com/releases/2010/06/100614171905.htm (accessed September 30, 2014).

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