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Study shows popular molecular tests

September 8, 2015
University of California - Davis Health System
Clostridium difficile is a common cause of infection and diarrhea in hospitalized patients, but a new study by pathologists suggests that many patients are mistakenly diagnosed and do not need antibiotic treatment.

Clostridium difficile is a common cause of infection and diarrhea in hospitalized patients, but a new study by UC Davis pathologists suggests that many patients are mistakenly diagnosed and do not need antibiotic treatment. As a result, patients are likely being over-diagnosed and over-treated, adding to concerns about antibiotic resistance, damage to the "good" bacteria that live in people's intestines, and increased health-care costs.

"It all depends on the type of test doctors use to diagnose patients," said Christopher R. Polage, associate professor of pathology and infectious diseases at UC Davis Medical Center and first author of the study. "Molecular tests are great at detecting C. difficile DNA in the laboratory but probably over diagnose a lot of patients in hospitals, if doctors assume that everyone with a positive result needs treatment."

On Sept. 8 Polage and colleagues reported results of a two-year study in JAMA Internal Medicine that examined clinical outcomes in patients with conflicting results by common tests used to diagnose C. difficile infection in the U.S. For the study, researchers evaluated 1,416 hospitalized patients tested for C. difficile at UC Davis, tracking the outcomes and severity of infection according to the results of toxin tests versus molecular tests such as PCR.

The surprising conclusion of the study was that newer molecular tests, which have been adopted by nearly half of U.S. hospitals over the last six years, are unable to distinguish infected patients who need treatment from patients who are colonized with the bacteria and do fine without treatment.

"Over the past several years there has been a movement nationally and around the world to change test methods for C. difficile diagnosis from traditional toxin tests to newer, molecular tests," Polage said. "This has been driven by concern that patients with infections were being missed, but very few studies looked at clinical outcomes to see if these concerns were justified."

In the study, patients diagnosed with C. difficile using a traditional toxin test had more severe disease, a longer duration of symptoms and greater risk of bad outcomes, validating their need for treatment. In comparison, patients who were positive by the new molecular test but negative by the traditional toxin test had milder symptoms and outcomes that were similar to patients without C. difficile, even without treatment.

"This finding caused us to question whether these patients really had a C. difficile infection or needed treatment at all," he said.

Polage noted that a large number of patients in acute-care facilities and hospitals are colonized with C. difficile without having an active infection and don't need treatment. Because colonized patients can be five to 10 times more common than those with symptomatic infection, he emphasized how important it is to use the test methods that can make this distinction.

"The reality is that diarrhea has many causes in hospitalized patients and sometimes patients with C. difficile colonization have diarrhea that has nothing to do C. difficile," he said. So, if you only detect DNA or the presence of the organism, you haven't necessarily proven that the organism is what's causing those symptoms. Yet, doctors routinely assume that all patients with positive molecular test results are infected and treat everyone with antibiotics, even when they might be better off left alone."

Treating patients for a C. difficile infection with antibiotics when they don't necessarily have an active infection contributes to antibiotic resistance and upsets the normal balance of bacteria in the intestines. It may even prolong diarrheal symptoms and increase the likelihood of transmission, he said.

"The more antibiotics we give, the more collateral damage we do to the microbiome, wiping out lots of beneficial bacteria that don't need to be treated. In addition, if we give antibiotics when they're not needed, we potentially perpetuate the cycle of C. difficile spread and infection."

Polage conducted the study because he wanted to know if the extra patients detected by molecular tests had clinically significant symptoms or any of the negative outcomes traditionally associated with C. difficile infection. After a five-year historical study showed no complications among patients with negative toxin tests, he decided to evaluate outcomes prospectively to determine if one type of test was a better predictor of clinical disease and outcome.

"We found that virtually all of the bad, negative outcomes occurred in the patients with positive toxin tests," Polage said. "This suggests that we should really focus on toxin-positive patients for treatment. There may be room for trying to improve the sensitivity of toxin tests and look for additional tests to help identify patients at greatest risk for bad outcomes. Apart from this, we need to understand that most toxin-negative patients don't need treatment and may not even be infected."

Data from the National Healthcare Safety Network (NHSN), an arm of the Centers for Disease Control and Prevention that tracks hospital-acquired conditions, suggest that 40 to 45 percent of NHSN-reporting hospitals currently use molecular tests, either alone or in combination with other tests. Polage says that this translates to almost half of facilities in the U.S. potentially over diagnosing patients.

He said that hospitals that made the switch to molecular tests experienced a dramatic increase in the number of patients they reported with positive C. difficile infection. Many noticed an immediate doubling in the number of these patients, adding to concerns that they would be penalized for using a more sensitive test relative to other facilities.

"Our data suggest that these hospitals were really over-reporting C. difficile, over diagnosing these patients, and that these patients probably didn't have Clostridium difficile infection," he said. "So, some of the reporting differences between hospitals may be an artifact of testing rather than a real difference in C. difficile infections."

Polage recommends that physicians and laboratories move in a direction of defining C. difficile disease based on the detection of toxins and limit molecular tests to screening, similar to Europe and the United Kingdom.

Story Source:

Materials provided by University of California - Davis Health System. Note: Content may be edited for style and length.

Journal Reference:

  1. Christopher R. Polage, Clare E. Gyorke, Michael A. Kennedy, Jhansi L. Leslie, David L. Chin, Susan Wang, Hien H. Nguyen, Bin Huang, Yi-Wei Tang, Lenora W. Lee, Kyoungmi Kim, Sandra Taylor, Patrick S. Romano, Edward A. Panacek, Parker B. Goodell, Jay V. Solnick, Stuart H. Cohen. Overdiagnosis ofClostridium difficileInfection in the Molecular Test Era. JAMA Internal Medicine, 2015; 1 DOI: 10.1001/jamainternmed.2015.4114

Cite This Page:

University of California - Davis Health System. "Study shows popular molecular tests." ScienceDaily. ScienceDaily, 8 September 2015. <>.
University of California - Davis Health System. (2015, September 8). Study shows popular molecular tests. ScienceDaily. Retrieved June 17, 2024 from
University of California - Davis Health System. "Study shows popular molecular tests." ScienceDaily. (accessed June 17, 2024).

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